OWASP (Open Web Application Security Project) is maintaining top 10 list of most common application vulnerabilities/weaknesses.
- Injection
 - Broken Authentication and Session Management
 - Cross-Site Scripting (XSS)
 - Insecure Direct Object References
 - Security Misconfiguration
 - Sensitive Data Exposure
 - Missing Function Level Access Control
 - Cross-Site Request Forgery (CSRF)
 - Using Components with Known Vulnerabilities
 - Unvalidated Redirects and Forwards
 

Links
Other links
- Introduction to OWASP
 - Secure Coding Practices – Quick Reference Guide